Data from Early Childhood Antibiotics and the Microbiome (ECAM) study

Source: R/Alldata.R

The data from a subset of the Early Childhood Antibiotics and the Microbiome (ECAM) study, which tracked the microbiome composition and development of 43 infants in the United States from birth to 2 years of age, identifying microbiome associations with antibiotic exposure, delivery mode, and diet.

Format

a phyloseq::phyloseq object

References

Bokulich, Nicholas A., et al. "Antibiotics, birth mode, and diet shape microbiome maturation during early life." Science translational medicine 8.343 (2016): 343ra82-343ra82.

https://github.com/FrederickHuangLin/ANCOM/tree/master/data